BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H12LP1|AL427689
(933 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1495 963 0.0
>3x_Contig1495
Length = 10008
Score = 963 bits (480), Expect = 0.0
Identities = 513/521 (98%), Gaps = 4/521 (0%)
Strand = Plus / Plus
Query: 417 tttatgatgctgtcaatgttgtgttgaaatgg--acagtagtagctaactgcatcttagc 474
||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 1 tttatgatgctgtcaatgttgtgttgaaatgtgtatattagtagctaactgcatcttagc 60
Query: 475 atctctatgtttgatgcttcttcttttctggatgtggatgcaaatcgaacacaaaaagac 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctctatgtttgatgcttcttcttttctggatgtggatgcaaatcgaacacaaaaagac 120
Query: 535 acaaagtccaatcaagcaattgaattggaatatcaattcaatctgctcaataactcggtg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaaagtccaatcaagcaattgaattggaatatcaattcaatctgctcaataactcggtg 180
Query: 595 tctgagtatttgcaatgcaacaattactttcatctatattcttcacatattgctgcttac 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgagtatttgcaatgcaacaattactttcatctatattcttcacatattgctgcttac 240
Query: 655 cttcatgattaattgtttccgttacaaaagactacaaattatccacgcgtctctcggaac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttcatgattaattgtttccgttacaaaagactacaaattatccacgcgtctctcggaac 300
Query: 715 gggtgcatggttccacatcgcgaggttctttgtggagctaatatttgcggtgctatgttt 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggtgcatggttccacatcgcgaggttctttgtggagctaatatttgcggtgctatgttt 360
Query: 775 caaatggatgacaccacactcagccatgtctgcatcagtaatgagcgaaacacaatcaac 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaatggatgacaccacactcagccatgtctgcatcagtaatgagcgaaacacaatcaac 420
Query: 835 agccgtagaagatgaagaagaaaaagatactgaggataattacagcgcgctaaatcctgc 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agccgtagaagatgaagaagaaaaagatactgaggataattacagcgcgctaaatcctgc 480
Query: 895 tagtgggact-ctkcagtcgatggatt-ctgctcactgtgt 933
|||||||||| || ||||||||||||| |||||||||||||
Sbjct: 481 tagtgggactactgcagtcgatggattcctgctcactgtgt 521
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7463
Number of Sequences: 1807
Number of extensions: 7463
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)